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repp list sequence

List sequences in the databases

Synopsis

List a sequence’s BLAST matches among databases.

repp list sequence [seq] [flags]

Examples

  repp list sequence GTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGAC --dbs igem

Options

  -d, --dbs string       comma separated list of sequence databases
  -x, --exclude string   keywords for excluding fragments
  -h, --help             help for sequence
  -t, --identity int     match %-identity threshold (see 'blastn -help') (default 100)

Options inherited from parent commands

  -v, --verbose   write DEBUG logs

SEE ALSO

  • repp list - List any of the things that repp uses to build plasmids
Auto generated by spf13/cobra on 11-Jun-2022